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Species belonging to selected taxon:

Ictalurus punctatus



ABOUT THIS RECORD

ID: MNEST007014
species: Ictalurus punctatus
miRNA family: mir-1281
source: miRNEST

Taxonomy by NCBI:
Ictalurus punctatus Ictalurus Ictaluridae Siluriformes Siluriphysi Otophysi Ostariophysi Otocephala Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTCCTCCTCCTCTCCCTCCC

miRNA*
GGAGGAGGAGGAGGAGGAGAAG

mismatches: 1
bulges: 1

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pre-miRNA
AAGAGAAAGAGAAGAGAGGAGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGACCGGTCTCATCCAGTGGAGATCTCTGGATCCATGACCATCCTTTTCCT
TCTCCTCCTCCTCTCCCTCCC
TGGGGCTCTCGATGTCTTC


dot-bracket secondary structure
........((((.(((((.((.(((((.((((((((((((((((((((((((..((((..((((((.((...)).))))))....)))).))))))))))
)))))))))))))).))))))
)....)))))....)))).



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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